Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905738.1_cds_XP_016455998.1_49876
CDS Infomation

[gene=LOC107780004] [db_xref=GeneID:107780004] [protein=polyadenylate-binding protein 3-like] [protein_id=XP_016455998.1] [location=complement(join(22085..22309,22416..22619,23117..23407,24155..24244,24339..24416,24505..25277,25762..26074))] [gbkey=CDS]
Sequence

ATGGCGGCGACGGCGGTTCCGCCACCGGCGGTGCAAACTCAGGCGGAAACGACGATGGTC
GGACCGACGCCACCGCCGACTCCGCAGGTGGCAATAATGGGAGGTGGTGGTAACGGTAGT
GGTGGTGTTGGTGTGACGACGAGTACGAACTATGCCCTGTACGTAGGGGATCTGGACACG
TCAGTGGAAGAAGGACAACTGTATGAGGTGTTTAACCATGTGGCACAAGTCGTGTCCATT
AGGGTTTGCAGGGATCAATCGGGCCGGTCCTCCCTCGGTTACGCTTATGTCAATTTCACT
TCTCCACAAGATGCTGCTACTGCTAGGGAGTTATTGAATTTTACTCAGTTGAATGGAAAA
CCTATGAGGATAATGTTTTCTCATAGAGATCCTAGTCTGCGGAAGAGCGGATATGCAAAT
GTTTTCATTAAGAATCTGGACTCGTCAATTGATAACAAGGCATTGTATGACACTTTTGCT
GCCTTTGGAACGGTTCTTTCCTGCAAGGTAGCTGCTGATATTAATGGTCAGTCAAAAGGA
TATGGATTTGTACAATTTGATCAGGACGAAGCTGCACACAATGCAATCAAGCGTCTGAAT
GGTATGTTGATAAATGATAAACAAGTCTATGTTGGCCACTTCATCCGTCGACAAGAAAGG
AGTCAAGCAAATGCCTCTGACAAATTCACAAATGTGTATGTGAAAGACCTTCCTGAAACT
ACCACTGATGAGGATCTTAAGAAGCTTTTTGAGAAGTATGGAACCATCACCAGTGCAGTA
GTTATGAAAGACAAAAATGGAAAGTCCAAGTGTTTTGGCTTCGTCAATTATGAGAGCTCG
GATGCTGCAGTCTCTGCTGTTGAACAGTTGAATGGCAGTTCCTTGAAAGAAAAAGTTCTG
TATGTAGGCAAGGCCCAGAAGAAATCAGAACGGGAAGCAAAACTGAAAGCCAAATTCGAA
CAAGAAAGAGCTAGTCGATTTGAGAAACTAAAAGGTGCTAACTTATATTTGAAAAATCTC
GACAGTGTGAGTGATGAAAATCTGAAAGAGTTATTCTCGGAGTACGGAACCATAACGTCC
TGCAAGGTGATGAGCGACTCAAAAGGGGTGAGCAAGGGTTCTGGCTTTGTTGCCTTCTCC
ACCCCCGAGGAAGCTACACGAGCTTTGAACGAAATGAATGGCAAGTTGATAGGAAAGAAA
CCTTTATTTGTTGCTGTTGCCCAGCGCAAGGATGAAAGAAGAGCATCGCTACAGGCACAT
TTTGCTCGGATGCGACCAGCTGGGGGGATGGCTCCTCCTCCTGGAGCTATGTCTGGGTTT
CACAATGGGGCACCTCGACTAGCTCCTCAGCAGGTCTACTTTGGTCAAGGTGCCCCAGGA
CTTATAGCACCTCAAGCCGCTGAATTTGGCTTCCAGCAACAACTCATGCCTGGACTTCGT
CCAGGTGTTGGCCCGAATTTCCTCTTGCCCTATCAGCTTCAGCGCCAAGGACAACACGGA
CGTGTTGGTGGAAGGAGAGGAGGGAATTCTCAACAGCAGCAGCAGTGGAACTCTGGTAGA
TTCAAACCCAATGGACGAAATGGCATGCATCCTAGCATCACTCAAGGTATGATGGGACCA
ATTATGCCAGCGCCATTTGATGCTTCTGCTATGACATCATCTACGTTGGACATCCAACGC
ACTAACCCAGTGCCACCATCAACACTTGCTTCTTCTTTGGCCTTTGCTTCTCCAGAAGAT
CAGCATCGGATGCTTGGAGAGCAGTTATTTCCACTTGTGGAACGCATTGAACGTGATCAT
GCTGGTAAAGTTACTGGGATGTTGCTTGAGATGGATCAAACTGAAGTGCTTCATCTCATC
GAGTCCCCTGATGCTCTCAATAAGAAAGTTTCCGAGGCTATGGATGTCCTTCGCTTAGCA
GGGCCAGGTTCTAGTGTTGGTGATAAATTTGGATCTCTCACCCTGAATGGATGA

Peptide Sequence

PEP ID

XP_016455998.1
PEP Infomation

PREDICTED: polyadenylate-binding protein 3-like [Nicotiana tabacum]
Sequence

MAATAVPPPAVQTQAETTMVGPTPPPTPQVAIMGGGGNGSGGVGVTTSTNYALYVGDLDT
SVEEGQLYEVFNHVAQVVSIRVCRDQSGRSSLGYAYVNFTSPQDAATARELLNFTQLNGK
PMRIMFSHRDPSLRKSGYANVFIKNLDSSIDNKALYDTFAAFGTVLSCKVAADINGQSKG
YGFVQFDQDEAAHNAIKRLNGMLINDKQVYVGHFIRRQERSQANASDKFTNVYVKDLPET
TTDEDLKKLFEKYGTITSAVVMKDKNGKSKCFGFVNYESSDAAVSAVEQLNGSSLKEKVL
YVGKAQKKSEREAKLKAKFEQERASRFEKLKGANLYLKNLDSVSDENLKELFSEYGTITS
CKVMSDSKGVSKGSGFVAFSTPEEATRALNEMNGKLIGKKPLFVAVAQRKDERRASLQAH
FARMRPAGGMAPPPGAMSGFHNGAPRLAPQQVYFGQGAPGLIAPQAAEFGFQQQLMPGLR
PGVGPNFLLPYQLQRQGQHGRVGGRRGGNSQQQQQWNSGRFKPNGRNGMHPSITQGMMGP
IMPAPFDASAMTSSTLDIQRTNPVPPSTLASSLAFASPEDQHRMLGEQLFPLVERIERDH
AGKVTGMLLEMDQTEVLHLIESPDALNKKVSEAMDVLRLAGPGSSVGDKFGSLTLNG

Transcript Sequence

Gene sequence data has not been registered.